Browse of TCMCG034C06301 protein

CDS

Accession Number	TCMCG034C06301
gbkey	CDS
Protein Id	XP_008351448.2
Location	complement(join(317206..317807,318321..318692,319124..320204,320499..320794,321362..321440,321584..321671,322542..322689,322761..323010,323711..325057,325486..325752,326414..326657,327066..327125,327473..327796,327901..327979,328248..328327,328413..328490,328939..329019,329102..329189,329310..329396,329667..329794,329946..330019,332016..332039))
Gene	LOC103414861
GeneID	103414861
Organism	Malus domestica

Protein

Length	1958aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA534520
db_source	XM_008353226.3
Definition	mediator of RNA polymerase II transcription subunit 13 [Malus domestica]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACGAATGTTTTCAAAATCGGTGGTTTTCATCAAGTATCATGGTTTCAGTTTCTTCCCCATGAGTCTGAGTTGATCCCACTACCAGATAAAAGTGCGAAAGATGCTGCCACACGGCTGGTACTTTCATCACATGTACAGTTGCAGAAGGATGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGGCCTTGGGATCCATCTCAAGGTGTGCACAATCCAGATGAGAAAATTAAACTCTGGCTTTTTCTTCCTGGGCGGCATTCAACTGTTGCTGACTCTGCTCAAGCTGCAGTCTCTAAATTAAGAGTTGTTGCATCTGGACTTTGGATGTCCCCTGGGGACTCAGAAGAGGTTGCAGCCGCCCTTTCTCAGGCTTTAAGGAATCGTATAGAAAGAGCACTATCTGGACTTGCCTACATGAGATTTGGAGATGTATTTTCAAAGTTCCACCCATCAGAAAGTGAAGAGCTTCTCAGGAAAGGGCAGCCTACAGTTGAATTTATCTTTGCTGCCACTGACGAGGGAATCTTTGTGCATGCTTTAGTATCTGCAAAGCATGTCCGAGCACTTTCCAATGGAGATCTAGAGAGAAGACTAAAGCATTCTTCCAAAAATAGTGGTTGTGGGCTTCCAGTGATTGTTTCTCCTCATGGAATGTGTGGTAGGCTAACTGGATGCTGTCCAAGTGATCTTGTCAAACAAGTGTATTTTAGTTCTAGCAAGTTTAAGACTGGAAACGGTTTTATTGGTTTGGCAAACCATGCCTCACAAGGTTCTGGTTGCCAACTAAGGGGTCAAAATTGCTATGTTGAAGTTACCCTTGGTTGTCCTAGACCTGGAAGTGACAGGTCCTTGCAAGCAAACTCAAACTCCTTAAGAAATACAGGAAAGCATAACCTTTCTGAATCTCCTGCTTTGGGAAGAGGTGATCAGAAGTTGGCATTGGATAATTCATCTGTTTATGAAAAAACATTTGTATATCCGGCTGAGGCAGTGCTTGTCCCGGCCCTGCAAGTGGCCAGATCATCTCTGAAGAGATTATGGCTACAAAATTGGATTGGACCCTCCATGGCTGGCTCATCTTTCTTTATGCTTTGTTCTGAAAACATAGAACCTGTGGAGGACTGGAATGAAACCGATGGGATTCGCACTCAACGTTGGTATAATAGTAGCAGCAACAGTAATAGTAGCAGCATTAGTAGCATAAGCAGCAGCTCCAGCGATAGTGATTACACGATGGCTACAGGAGCCAGCGAACTAGAGGCAGATGCCGATTCTTTAACCTGTAGACAGTCTGGGTTATCTTTTAATGATCGGTTGGGAAATGATATCTCCAAATCGGGTTTTAAGCGTCCGCGAGCTGGAATGGCAGATTCATTTGCTGAAGTAGGTACAGCTACAAGTGCTTCTCTGCAGGATGCATACAACTCTGATTTTAGTTCCATGGAAGTTAGCAACTCAGCAATCCCTGGACTTGCAAATGAGCAGATTGGATCTCATTGGGATTGGGATGTTGATGACAGAGATGGCACTGATATCCATGCTTTGATTAATGAATTTGGAGATTTCGGTGACCTCTTTGAAGATGATGTTTTGCCTTTTGGGGAGCCCCCAGGAACTGCCGAATCTCAGTCTCTCATGTTTTCTGCACCAGACCCTGGCGATGTAGTTGACAATCCAGTTGGGATGATGGATGTTTCTGATCAGTTGCTTTTGTCTGACGGCTTTGCATCCTTTGAAAGCTTTATTCCACCCCCTCCAGCAGCCATGGAAGAGCCGCTCATTAAAAATCAAGAAGTCATCAATAGTGTGATGTCCTCAGCTCCAGTCAACTGCTCTTCAGCATCTAATATAAGTGAATTTGATCATATAATAAAAGCTGAGGCACTGATGACATTTGCTCCTGAATATGGAGCTGTTGAAACACCTACAAGTGAAGTTTCATCGTCCGTTTTTAGAAGCCCATACTTGCCAAAATCTCGAAAAGCGGAGAGTTCAAATTCAAACTCAAGCATTTACACATATGGTCCAACACCACCTTCTTCTTGCTTTGATGGATCTGATGAGAAGACTGGCATGCCAATAAATTCAAAATCATGTCCTGGAAAGAAGGATGCAAGCGATATTATCCGGTCGAAGAATTATTACACTCATGTGGAGAGTGGAAAAGATCAACAAGATGGAAGATTGCTTACAGGTAGTAATGGAATTGTGCTCGCCCATGATGGTGCAGCATCATCTCCTTTCCCAATTCTCAATTCTACAAATGCTGTTAAAGTGGCCCAGAGGAAAATCACTGAAGGCAGATTTGAGTCAGAAAATCCCTTTCTGTCTATGAGGACCATTCTTGCGACTGAAGTTGAGTGCATTCTATTTCAAACTTCAATGTGTAGAATACGGCACACCCTATTGTCTTCAAGCAGTCTCTCATCTACTGGTTTCAGTAGTCTGCCAGGTGACCAAAGTGTCATGCCAGAAAACATGTCTGGAAAGTATGAGGCTAAGAGGAAAGAATCGATACCCGTTAGAATTGCTGGTGATATTGATAGAGGAATGACAGATGGGCATCCTAATGCACCTGTGGGTGTCTGGCGCACTGTAGGAGCTCCTAGAGCCCCTAAACCCACAAGTTCATCTAGTAAAGAAATTAGCCCGTCTTTGCCTCATTCTTCCTTCAATGAAGAAAGTTTACTATCCTATGGGCAAAGACAACCACTTCAGGAACTTCTGGATGGATTTACATTACTCGTACAGCAAGCTACATCCTTTGTTGATTTGGCCCTAGACTCAGATTGTGGTGATGGTCCTTATGGTTGGCTGGCATTACAAGAGCAATGGAGGAAGGGATTTTCTTGTGGGCCTTCTATGGTCCATGCAGGTTGTGGGGGCACACTGGCTTCTTGTCACTCCCTGGACATTGCTGGTGTGGAGTTAGTTGATCCACTCTCTGCAGATGTTCATGCTTCATCTGTGATTAGTTTGCTGCAGTCTGACATAAAGACGGCACTAAAGTCTGCATTTGGTATTCTGGATGGGCCAATGTCAGTCACTGATTGGTGTAGAGGTCGCAACCAATCAGGTGAAAGCACGCTTGATGGATATTCTGCTGAGTCCGCTATAAGTGAATGTAGAGATGTTGCACCTTCTATTGGAGAACCATTGAGCCCGTCTCCATCTAGTTCTGCTGGATCAACTTACATTAAAGTTTCCAGTGCAATGGATGGAGTAAAAGCGGAAGAGACATCCCAAAGAAGATCAAACCAAGACAACTGCACTTCTGAGTCTGACCTGCAGACATGCTCCCGGCTAAGACCTACACTTTTTGTTAATCCGTTGCCTGCTATACTTGTTGGGTATCAGGATGACTGGCTTAAGACATCAGCAAGCTCTCTGAAACATTGGGAAAAGGCTCCGCTTGAGCCATATGCTCTACAAAAACCTATTACTTATTCTGTTGTATGTCCAGACATTGATCCCCTTGCATCTGCTGCTGCTGATTTTTTCCAACAACTAGGAACTGTCTATGAAACATGCAAACTGGGAACTCATTTACCCCAGATTGTTGGGAACCAAATGGAGGTGGACTCTGGGAGAAGGCCATCTCCTGGGTTTGTCCTACTTGATTGCCCTCAAGCAATGAAGATGGAAAGCAGGAATGCATCTTTTGTGAGCTCAATAAGTGATTATTTTCTCTCTCTTTCGAATGGATGGGACCTGACAAGCTACCTTAAGTCTCTCTCAAAGGCACTCAGAGGTTTGAAACTTGGTCACTGCTTGTCCACAAACGCAAAAGAAGGAAGTAGTGGTCCTTCAACGGTGATTTATGTTGTGTGCCCCTTCCCTGAGCCTATTGCAGTTTTACAGACTGTCATTGAGTCTTCTGTTTCTATCGGATCGGTCATTTTCCAATCAGACAGAGAAAGGAGATCTCTATTGCACAGTCAGGTTTCCAAGGCATTGAGCTATTCGGCAACAGTGGATGAGGCATCAATATCAAATATTTTAGTACTTTCTGGTTTTAGTATTCCTAAATTGGTACTGCAGATTGTGACAGTGGATGCCATTTTTAAAGTTACAAGCCCATCACTGAATGAGCTTGTAATTCTCAAGGAGACTGCTTTTACTGTTTACAACAAGGCTCGCCGAATATCACGAGGAGCATCTAGTGATGCAGTGCAATCATCATCACTGTCTAATAGACCACATGCTGTCCTCACACAAATGTCGTCTCCTACTCCGGGGATGTGGAAGGATTGTGTTGGCTCTCGAATTACTGGGCATTCCCTTCCAAGAGAGGGTGAAATTGATGCTAGTTTGAGGACTGGTGGCTGGGATAGTTCATGGCAAACAACAAGAAGTGGAGCAGTAAGCTGTGATCCCAACAGAATTGGAGATTTTTTTCCGCAAGATGAGACTCGCTACATGTTTGAGCCACTTTTTATCCTTGCGGAACCTGGTTCTCTAGAGCGTGCATTGTCACCCTTAGCTTTTGGTAATTTGTCATTAGAATCTTCAAAGCCATTGTCAGATGACAGTAGTGGAGGCTTTCTGCAGAATGCAAGTTTGGGTGGAAGTGCGGATTCTGGATCAGGCTCTCAAGATGGATCTGAGCTAGATAAGACTCCAAGCCTGCATTGTTGCTACGGATGGACAGAGGACTGGCGTTGGCTAATATGTATCTGGACAGATTCAAGGGGAGAATTACTTGATAGCCACATATTCCCTTTTGGTGGAATCAGCAGTAGACAGGACACAAAGGGGTTGGAATGCCTTTTTGTGCAAGTTCTGCAGCAAGGCTGTCAGATACTGCAGGCATGCTCTTCTGATACTGGTGTTGCCAAGCCAAGGGACTTTGTGATTGCACGCATTGGAAGTTTCTATGAACTTGAATACCAAGAGTGGCAGAAAGCAATTAATTCAGTTGGGGGTTCAGAAGTGAAAAAATGGCACTTGCAACTGCGGCGATCTGTGTCTGATGGGATGTCTGCTAGTAGTAATGGGCCTTCCATGCAACAGCAGGAAATGAGTATGATTCAAGAAAGAACCCTACCTTCTTCACCTGGCCCTCTGTATGGCAGCTCTCACTCAAAAATGTCTGGATATATGAAAGGTGGCTTAGGACAACCTTCTGTCAGAAAGCAGCTCATGGGCACACAGTTAATGGACAGCTCAAGGAGTTTGCTTCAGTGGGTGCAAAGTATCAGCTTTGTTACAATTGCAATTGATCACTCTTTGCATCTTGTTTTTCAAGCAGATACACAATCTCCGGGTGCTCAAGGTGCTGTCGGTATGGGCTCGTCAGCATATCTGGAAGGCTTCACACCTGTGAAGTCTCTTGGTTCCACACCTGCTTCTCACATTCTGATCCCATCACCGAGCATGCGATTCCTCCCGCCAACACCTCTTCAGCTGCCCACGTGCCTCACTGCCGAATCACCTCCACTAGCCCATCTCCTTCATAGTAAAGGCTCTGCTATCCCCCTTTCTACTTGTTTTGTGGTTTCCAAAGCTGTACCTACTGTGAGGAGAGATCGTAGGAGCAACTTGAAAGAAGAATGGCCTTCATCTCTTTTGGTCAGTCTTATTGATCATTATGGAGGTAATAGCTTTAGCCAAGACAAACTCATGAGGGGTAATACCAAACAAGCTGGAAGGAGTCCAAGCTTGGAAGCTAGAGAATTGGAGTTTGAGACTCATGTCATTCTGGAATCCCTGGCAACCGAGCTTCATGCGCTCTCATGGATGACTGCGAGTCCAGCGTACCTGGAGAGGCGAAGTGCACTGCCGTTTCATTGCGATATGGTTTTGAGATTGAGGAGGCTTTTGCATTTTGCTGACAAGGAGCTCTCCAGGCATCAAGAGAAGGCTTAG

Protein:   MWTNVFKIGGFHQVSWFQFLPHESELIPLPDKSAKDAATRLVLSSHVQLQKDGFLSTWTNSFVGPWDPSQGVHNPDEKIKLWLFLPGRHSTVADSAQAAVSKLRVVASGLWMSPGDSEEVAAALSQALRNRIERALSGLAYMRFGDVFSKFHPSESEELLRKGQPTVEFIFAATDEGIFVHALVSAKHVRALSNGDLERRLKHSSKNSGCGLPVIVSPHGMCGRLTGCCPSDLVKQVYFSSSKFKTGNGFIGLANHASQGSGCQLRGQNCYVEVTLGCPRPGSDRSLQANSNSLRNTGKHNLSESPALGRGDQKLALDNSSVYEKTFVYPAEAVLVPALQVARSSLKRLWLQNWIGPSMAGSSFFMLCSENIEPVEDWNETDGIRTQRWYNSSSNSNSSSISSISSSSSDSDYTMATGASELEADADSLTCRQSGLSFNDRLGNDISKSGFKRPRAGMADSFAEVGTATSASLQDAYNSDFSSMEVSNSAIPGLANEQIGSHWDWDVDDRDGTDIHALINEFGDFGDLFEDDVLPFGEPPGTAESQSLMFSAPDPGDVVDNPVGMMDVSDQLLLSDGFASFESFIPPPPAAMEEPLIKNQEVINSVMSSAPVNCSSASNISEFDHIIKAEALMTFAPEYGAVETPTSEVSSSVFRSPYLPKSRKAESSNSNSSIYTYGPTPPSSCFDGSDEKTGMPINSKSCPGKKDASDIIRSKNYYTHVESGKDQQDGRLLTGSNGIVLAHDGAASSPFPILNSTNAVKVAQRKITEGRFESENPFLSMRTILATEVECILFQTSMCRIRHTLLSSSSLSSTGFSSLPGDQSVMPENMSGKYEAKRKESIPVRIAGDIDRGMTDGHPNAPVGVWRTVGAPRAPKPTSSSSKEISPSLPHSSFNEESLLSYGQRQPLQELLDGFTLLVQQATSFVDLALDSDCGDGPYGWLALQEQWRKGFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADVHASSVISLLQSDIKTALKSAFGILDGPMSVTDWCRGRNQSGESTLDGYSAESAISECRDVAPSIGEPLSPSPSSSAGSTYIKVSSAMDGVKAEETSQRRSNQDNCTSESDLQTCSRLRPTLFVNPLPAILVGYQDDWLKTSASSLKHWEKAPLEPYALQKPITYSVVCPDIDPLASAAADFFQQLGTVYETCKLGTHLPQIVGNQMEVDSGRRPSPGFVLLDCPQAMKMESRNASFVSSISDYFLSLSNGWDLTSYLKSLSKALRGLKLGHCLSTNAKEGSSGPSTVIYVVCPFPEPIAVLQTVIESSVSIGSVIFQSDRERRSLLHSQVSKALSYSATVDEASISNILVLSGFSIPKLVLQIVTVDAIFKVTSPSLNELVILKETAFTVYNKARRISRGASSDAVQSSSLSNRPHAVLTQMSSPTPGMWKDCVGSRITGHSLPREGEIDASLRTGGWDSSWQTTRSGAVSCDPNRIGDFFPQDETRYMFEPLFILAEPGSLERALSPLAFGNLSLESSKPLSDDSSGGFLQNASLGGSADSGSGSQDGSELDKTPSLHCCYGWTEDWRWLICIWTDSRGELLDSHIFPFGGISSRQDTKGLECLFVQVLQQGCQILQACSSDTGVAKPRDFVIARIGSFYELEYQEWQKAINSVGGSEVKKWHLQLRRSVSDGMSASSNGPSMQQQEMSMIQERTLPSSPGPLYGSSHSKMSGYMKGGLGQPSVRKQLMGTQLMDSSRSLLQWVQSISFVTIAIDHSLHLVFQADTQSPGAQGAVGMGSSAYLEGFTPVKSLGSTPASHILIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTCFVVSKAVPTVRRDRRSNLKEEWPSSLLVSLIDHYGGNSFSQDKLMRGNTKQAGRSPSLEARELEFETHVILESLATELHALSWMTASPAYLERRSALPFHCDMVLRLRRLLHFADKELSRHQEKA